Overview Annotation GWAS Evidence Associated genes

P12981

Metabolite ID
P12981
Deionized mass
612.1582 Da
Average m/z
613.1649
Average RT
11.3218
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
13
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

13 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.933e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)3.492e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.416e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)3.067e-13
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)1.65e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.036e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.072e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.53e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.245e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)1.312e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.527e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.527e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.492e-13