Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P12326

Metabolite ID
P12326
Deionized mass
343.2052 Da
Average m/z
344.2140
Average RT
11.0657
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.761e-14
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)7.509e-14
Glyma.14G171400 hypothetical protein NA 3Chr14:42398866–42404627 (+)3.001e-12
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)3.494e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.555e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)2.025e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.761e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.617e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)7.012e-11
Glyma.20G100400 hypothetical protein AT1G50380:AT1G50380:Prolyl oligopeptidase family protein 2Chr20:34346064–34357352 (+)4.765e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.246e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.246e-13
Glyma.01G222700 hypothetical protein AT1G64060:RBOH F:respiratory burst oxidase protein F 1Chr01:55163018–55172994 (+)3.638e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.862e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.997e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.997e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.997e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.152e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.176e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.473e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)7.752e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.535e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)9.917e-11
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)7.012e-12
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)7.012e-12
Glyma.08G114400 hypothetical protein AT4G25650:ACD1-LIKE:ACD1-like protein 1Chr08:8750828–8756629 (-)1.787e-11
Glyma.08G114500 hypothetical protein AT4G38500:AT4G38500:Sept9 (DUF616) 1Chr08:8757033–8762145 (+)1.787e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.633e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)1.043e-12
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)1.043e-12
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)9.624e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.439e-15
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)5.551e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)6.241e-14
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.23e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.124e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.712e-14
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)5.648e-12
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)6.918e-11
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)6.918e-11
Glyma.14G045100 hypothetical protein AT3G43600:AAO2:aldehyde oxidase 2__AT1G04580:AO4:aldehyde oxidase 4__AT5G20960:AO1:aldehyde oxidase 1__AT2G27150:AAO3:a… 1Chr14:3438828–3448015 (-)2.715e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.721e-13
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)3.001e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.138e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.287e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)8.617e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.669e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.831e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.427e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.716e-13
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)4.949e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.185e-12
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)9.315e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.529e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.385e-11
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)2.782e-13
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.344e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)1.24e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.924e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.924e-11
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 1Chr19:3839225–3845784 (-)2.759e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)5.91e-13
Glyma.20G100300 hypothetical protein NA 1Chr20:34338338–34339114 (+)4.765e-12