Overview Annotation GWAS Evidence Associated genes

P11442

Metabolite ID
P11442
Deionized mass
373.2181 Da
Average m/z
374.2261
Average RT
10.7889
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
146
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

146 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)2.414e-13
Glyma.06G201700 hypothetical protein NA 3Chr06:18577883–18617874 (+)9.81e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 3Chr16:35170253–35173950 (-)6.432e-16
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)3.866e-13
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.398e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.193e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.193e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.193e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.989e-14
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)4.966e-14
Glyma.11G086500 hypothetical protein AT2G17530:AT2G17530:Protein kinase superfamily protein__AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr11:6505886–6510196 (-)5.236e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.629e-14
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)5.731e-12
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)7.897e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.334e-11
Glyma.01G010200 hypothetical protein AT1G32060:PRK:phosphoribulokinase 1Chr01:993024–997480 (-)5.808e-11
Glyma.01G010400 SLTI248 DEAD-box RNA helicase AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr01:1009200–1013846 (+)2.709e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.416e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)2.414e-13
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)8.401e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)2.771e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.006e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.34e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.756e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)6.029e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)2.874e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.166e-14
Glyma.03G022300 hypothetical protein AT3G60880:DHDPS1:dihydrodipicolinate synthase 1 1Chr03:2331191–2334210 (-)1.489e-13
Glyma.03G022500 hypothetical protein NA 1Chr03:2339702–2345448 (+)1.161e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.401e-16
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.268e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)1.699e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.903e-12
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)1.106e-13
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)1.962e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.472e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.41e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)3.182e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)7.954e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.32e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.279e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.735e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.404e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)3.477e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)6.634e-11
Glyma.06G131700 hypothetical protein NA 1Chr06:10850105–10855203 (+)1.458e-13
Glyma.06G132100 hypothetical protein NA 1Chr06:10873977–10879178 (-)1.458e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.955e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.955e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)6.571e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)6.422e-12
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)7.69e-13
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)7.69e-13
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)2.153e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.76e-13
Glyma.09G075500 hypothetical protein NA 1Chr09:8234794–8241097 (+)8.572e-11
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)8.572e-11
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)8.572e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.641e-16
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.056e-21
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.763e-19
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.855e-13
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)1.337e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)4.38e-13
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)3.656e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)1.614e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.615e-13
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)1.098e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)2.259e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.56e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)6.926e-13
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.193e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.193e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.193e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.614e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.193e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.193e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)7.878e-12
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)3.107e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.024e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.76e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)9.347e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)9.347e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)9.347e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)9.347e-12
Glyma.11G086100 hypothetical protein NA 1Chr11:6481228–6484662 (+)5.236e-11
Glyma.11G086300 hypothetical protein AT4G35520:MLH3:MUTL protein homolog 3 1Chr11:6487310–6496559 (-)5.236e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)8.05e-12
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)3.195e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.071e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.04e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.04e-13
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)8.878e-16
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)8.878e-16
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.689e-13
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)7.191e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.718e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.718e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.628e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.512e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)3.494e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)3.057e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)1.12e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.845e-16
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.873e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.845e-16
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.845e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.424e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.827e-15
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)4.744e-14
Glyma.15G257500 hypothetical protein NA 1Chr15:48713244–48717192 (+)1.247e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.514e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.703e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.79e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.354e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)8.392e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)3.331e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.833e-13
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)3.231e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.002e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.002e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)1.265e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.263e-15
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)5.861e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.379e-12
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)2.859e-12
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)6.066e-13
Glyma.17G145500 hypothetical protein AT4G17510:UCH3:ubiquitin C-terminal hydrolase 3 1Chr17:11947484–11955499 (-)1.821e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.097e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)3.434e-11
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)2.346e-12
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)3.262e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)3.262e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)7.897e-13
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)9.6e-13
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)7.897e-13
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)1.89e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)8.855e-12
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)5.243e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)1.227e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)1.536e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)3.151e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)3.15e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.237e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.237e-13
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.379e-11