Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P11340

Metabolite ID
P11340
Deionized mass
695.2023 Da
Average m/z
696.2086
Average RT
10.7560
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.04e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.592e-11
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 3Chr14:42298358–42306613 (-)1.686e-11
Glyma.17G251200 hypothetical protein NA 2Chr17:40605249–40607536 (+)3.814e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.592e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.837e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.428e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)4.458e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.175e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.444e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.28e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.28e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.475e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.515e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.515e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.515e-14
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)4.672e-12
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)8.773e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)7.651e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.301e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.235e-15
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.307e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.151e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.008e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.03e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.03e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)5.55e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)4.707e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)7.237e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)7.237e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)7.237e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)7.237e-12
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)7.555e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.536e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.536e-11
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)1.196e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.416e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.416e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.417e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.013e-11
Glyma.14G171100 hypothetical protein NA 1Chr14:42357087–42363791 (-)1.686e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.42e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.568e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.42e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.42e-12
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)4.301e-12
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)4.301e-12
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)4.301e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)3.183e-11
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)9.79e-14
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.807e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.04e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)6.464e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.235e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.994e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.115e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)2.24e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)2.24e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)8.047e-14
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.232e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)3.473e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)3.473e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.682e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.682e-11
Glyma.17G251700 hypothetical protein NA 1Chr17:40625907–40628028 (-)3.814e-12
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)1.459e-11
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 1Chr19:3471299–3475645 (+)1.061e-11
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)5.12e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.547e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)7.84e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.554e-13
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)1.432e-12
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)1.65e-13
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)4.376e-13
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)7.607e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)2.319e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)9.559e-12