Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P10294

Metabolite ID
P10294
Deionized mass
396.0641 Da
Average m/z
397.0709
Average RT
10.4028
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
89
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

89 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 5Chr08:11525692–11536927 (+)2.553e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.111e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)1.168e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)7.588e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.492e-14
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)4.921e-12
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)1.624e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)2.3e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.035e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)6.377e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.111e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.327e-12
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)2.587e-11
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)5.05e-11
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)5.05e-11
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)5.05e-11
Glyma.01G127400 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein__AT1G55210:AT1G55210:Disease r… 1Chr01:43890586–43892006 (+)1.711e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.404e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.783e-13
Glyma.03G152800 hypothetical protein AT4G09820:TT8:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr03:36782245–36790298 (+)3.86e-12
Glyma.03G153200 hypothetical protein NA 1Chr03:36815745–36819041 (-)3.86e-12
Glyma.03G154000 hypothetical protein NA 1Chr03:36898114–36903520 (-)4.77e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.476e-14
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)1.677e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)1.677e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)1.677e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)9.029e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)9.718e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.257e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)6.59e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.076e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.281e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.808e-14
Glyma.06G168700 hypothetical protein AT5G63520:AT5G63520:F-box/LRR protein 1Chr06:14104416–14111842 (+)2.852e-12
Glyma.06G184100 hypothetical protein NA 1Chr06:15897746–15902462 (+)2.59e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)1.215e-11
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)1.656e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)5.093e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.492e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.492e-14
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.492e-14
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.492e-14
Glyma.08G150000 hypothetical protein AT2G32850:AT2G32850:Protein kinase superfamily protein 1Chr08:11518864–11523442 (-)4.51e-12
Glyma.08G150300 hypothetical protein NA 1Chr08:11550134–11555581 (+)6.986e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)2.962e-14
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)7.743e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.488e-14
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.488e-14
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)3.436e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.077e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.077e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.077e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.077e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.903e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.265e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.265e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.804e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.804e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.139e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.35e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.35e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.35e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)3.002e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.052e-13
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.003e-17
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.371e-16
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.003e-17
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.003e-17
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.958e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)2.678e-13
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.341e-13
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.3e-11
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)1.894e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)9.119e-14
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.176e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.332e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)5.452e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)5.452e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)6.377e-11
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)6.252e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)5.09e-13
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)1.213e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)2.853e-13
Glyma.18G267500 hypothetical protein NA 1Chr18:55179516–55181798 (-)2.242e-11
Glyma.18G272000 hypothetical protein NA 1Chr18:55503155–55508039 (+)5.678e-11
Glyma.18G272100 hypothetical protein AT5G15630:IRX6:COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family 1Chr18:55506268–55509726 (-)5.678e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.55e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.915e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.915e-12