Overview Annotation GWAS Evidence Associated genes

P09770

Metabolite ID
P09770
Deionized mass
178.0624 Da
Average m/z
179.0690
Average RT
10.2569
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
137
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

137 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.185e-13
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.576e-17
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.363e-12
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 2Chr02:29019977–29028838 (-)4.403e-14
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)4.388e-17
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)9.502e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)1.888e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.594e-17
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)8.74e-20
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)2.594e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.943e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.079e-14
Glyma.14G202500 hypothetical protein NA 2Chr14:46773824–46775761 (+)6.261e-14
Glyma.15G140400 hypothetical protein NA 2Chr15:11495189–11495691 (+)6.885e-12
Glyma.15G140700 hypothetical protein NA 2Chr15:11520847–11522863 (-)1.194e-11
Glyma.16G143700 hypothetical protein AT3G50830:COR413-PM2:cold-regulated 413-plasma membrane 2 2Chr16:30388030–30390647 (-)1.866e-12
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)3.24e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.543e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)1.423e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.576e-17
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.023e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.023e-12
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)4.027e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)1.576e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.026e-13
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.997e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.01e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.447e-13
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.35e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.986e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.387e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.387e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.387e-13
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.43e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.065e-20
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.707e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.179e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)4.598e-12
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)4.598e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.967e-16
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.967e-16
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.414e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)1.019e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)8.092e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)2.041e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.616e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.108e-12
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)4.144e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)5.917e-13
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)5.283e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.032e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.506e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.313e-12
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)5.11e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.132e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.054e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.054e-13
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)5.413e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.054e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.054e-13
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)5.109e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)5.109e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)5.109e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.242e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.272e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)6.131e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.115e-16
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.115e-16
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.115e-16
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)9.623e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)4.641e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.431e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.431e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.935e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)9.428e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)6.523e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.74e-20
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)7.861e-17
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)3.921e-16
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)3.166e-15
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.594e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.697e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)7.49e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)7.49e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)7.49e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.855e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.079e-14
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)2.149e-15
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)6.261e-14
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)2.846e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.373e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.63e-16
Glyma.15G140500 hypothetical protein NA 1Chr15:11496139–11502209 (-)8.314e-11
Glyma.15G140900 hypothetical protein AT3G66658:ALDH22A1:aldehyde dehydrogenase 22A1 1Chr15:11538070–11545857 (-)9.502e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)1.444e-14
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)8.102e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)4.172e-12
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)7.048e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)4.391e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)4.837e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.479e-13
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)9.325e-15
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.185e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.873e-12
Glyma.16G111800 hypothetical protein AT2G17520:IRE1A:Endoribonuclease/protein kinase IRE1-like protein 1Chr16:24720965–24731678 (-)4.682e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)6.94e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.732e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.079e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.976e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)8.336e-13
Glyma.16G142800 hypothetical protein AT2G23760:BLH4:BEL1-like homeodomain 4 1Chr16:30201467–30210093 (+)2.28e-11
Glyma.16G143100 hypothetical protein AT2G23740:SUVR5:histone-lysine N-methyltransferase SUVR5 1Chr16:30245352–30261255 (-)2.28e-11
Glyma.16G143200 hypothetical protein AT5G66600:AT5G66600:electron transporter, putative (Protein of unknown function, DUF547) 1Chr16:30273151–30278680 (+)2.28e-11
Glyma.16G143600 hypothetical protein AT3G50820:PSBO2:photosystem II subunit O-2 1Chr16:30379885–30382483 (-)2.28e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)8.144e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.038e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.038e-14
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.543e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.625e-13
Glyma.16G164300 hypothetical protein NA 1Chr16:32316376–32319476 (-)7.546e-12
Glyma.16G165300 hypothetical protein NA 1Chr16:32447317–32449688 (-)4.016e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)5.839e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.348e-12
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)7.185e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.983e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.983e-12
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)5.824e-11
Glyma.19G127700 hypothetical protein AT5G12250:TUB6:beta-6 tubulin 1Chr19:38632803–38635633 (+)4.317e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)7.232e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.636e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.26e-12
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 1Chr20:4655939–4664465 (-)2.483e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)6.755e-13
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.344e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.094e-13
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)2.763e-11
Glyma.20G225700 hypothetical protein AT1G08790:AT1G08790:1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase epsilon-1, putative (DUF1685) 1Chr20:45982621–45984242 (-)6.229e-11