Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P07766

Metabolite ID
P07766
Deionized mass
499.1276 Da
Average m/z
500.1345
Average RT
9.5601
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)1.178e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.267e-11
Glyma.16G159100 hypothetical protein NA 2Chr16:31889835–31894662 (+)1.077e-12
Glyma.16G161500 hypothetical protein NA 2Chr16:32076715–32092322 (-)2.644e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.123e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)1.389e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)9.241e-11
Glyma.03G022400 hypothetical protein NA 1Chr03:2334661–2335316 (+)2.906e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.163e-13
Glyma.03G223000 hypothetical protein AT1G02500:SAM1:S-adenosylmethionine synthetase 1 1Chr03:42579900–42582675 (+)8.166e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)3.921e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)4.729e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)1.653e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)1.652e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.527e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.098e-13
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.387e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.463e-13
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.143e-13
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)2.518e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)3.488e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)6.649e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)3.067e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.218e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)9.272e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.44e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)9.664e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)9.664e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)9.664e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)9.664e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)3.272e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)6.135e-11
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)6.135e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)6.56e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.267e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.168e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.79e-11
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)4.654e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.996e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.997e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.264e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)9.563e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)9.142e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)9.563e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)9.563e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)1.753e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)8.263e-12
Glyma.18G243300 hypothetical protein AT3G24090:GFAT:putative glucosamine-fructose-6-phosphate aminotransferase 1Chr18:53151480–53157909 (+)9.216e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.474e-12
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)2.474e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.963e-11
Glyma.19G216500 hypothetical protein AT3G62390:TBL6:TRICHOME BIREFRINGENCE-LIKE 6 1Chr19:46951591–46954520 (+)7.345e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.466e-12