P06573
Metabolite ID
P06573
Deionized mass
453.1741 Da
Average m/z
454.1800
Average RT
9.0979
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
109
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
109 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 4 | Chr16:35831912–35835153 (+) | 4.828e-13 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 4.742e-12 | |
| Glyma.19G037200 | hypothetical protein | AT5G15680:AT5G15680:ARM repeat superfamily protein | 4 | Chr19:5178930–5212367 (+) | 8.731e-17 | |
| Glyma.07G100400 | hypothetical protein | AT3G18050:AT3G18050:GPI-anchored protein | 2 | Chr07:9523110–9526319 (+) | 5.146e-13 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.619e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.619e-11 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 2 | Chr14:5675792–5680343 (+) | 6.257e-13 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 3.08e-11 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 1.177e-13 | |
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 2 | Chr16:24626024–24635513 (+) | 6.342e-11 | |
| Glyma.16G196900 | hypothetical protein | NA | 2 | Chr16:35841279–35846894 (-) | 4.453e-13 | |
| Glyma.17G215800 | Aberrant root formation protein 4 | AT5G11030:ALF4:aberrant root formation protein | 2 | Chr17:36328551–36338097 (+) | 2.085e-11 | |
| Glyma.17G216700 | hypothetical protein | AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein | 2 | Chr17:36510062–36519347 (+) | 2.51e-11 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1134716–1143232 (+) | 1.372e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 4.742e-12 | |
| Glyma.19G029600 | hypothetical protein | NA | 2 | Chr19:3681517–3690884 (-) | 2.006e-11 | |
| Glyma.19G029800 | hypothetical protein | NA | 2 | Chr19:3724518–3729860 (-) | 5.204e-12 | |
| Glyma.19G033700 | hypothetical protein | AT3G02320:AT3G02320:N2,N2-dimethylguanosine tRNA methyltransferase__AT5G15810:AT5G15810:tRNA (guanine(26)-N(2))-dimethy… | 2 | Chr19:4332261–4339570 (+) | 1.489e-13 | |
| Glyma.19G039200 | hypothetical protein | NA | 2 | Chr19:5581743–5589236 (+) | 2.224e-12 | |
| Glyma.19G041000 | hypothetical protein | NA | 2 | Chr19:5964641–5965947 (-) | 3.85e-15 | |
| Glyma.20G120200 | hypothetical protein | NA | 2 | Chr20:36268998–36282456 (-) | 2.806e-11 | |
| Glyma.01G167600 | hypothetical protein | AT5G66290:AT5G66290:uncharacterized protein | 1 | Chr01:50524157–50528111 (-) | 6.366e-13 | |
| Glyma.03G017800 | hypothetical protein | AT4G00770:TRM9:DUF4378 domain protein | 1 | Chr03:1780719–1783735 (+) | 6.828e-11 | |
| Glyma.03G018600 | hypothetical protein | AT2G45695:AT2G45695:Ubiquitin related modifier 1 | 1 | Chr03:1859210–1862572 (-) | 6.65e-13 | |
| Glyma.03G018800 | hypothetical protein | AT2G45680:TCP9:TCP family transcription factor | 1 | Chr03:1875182–1876855 (+) | 4.533e-12 | |
| Glyma.03G019600 | hypothetical protein | AT2G45640:SAP18:SIN3 associated polypeptide P18 | 1 | Chr03:2007617–2009871 (+) | 9.168e-12 | |
| Glyma.03G019700 | hypothetical protein | AT3G61130:GAUT1:galacturonosyltransferase 1 | 1 | Chr03:2010835–2018418 (+) | 9.487e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.618e-12 | |
| Glyma.03G169700 | hypothetical protein | AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… | 1 | Chr03:38442950–38448706 (+) | 8.331e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 3.867e-11 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 1.685e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 8.347e-15 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 1.132e-14 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 1.132e-14 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 6.179e-16 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 1.328e-15 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 1.328e-15 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 1.328e-15 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 1.55e-13 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 3.715e-13 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 7.618e-14 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 3.66e-15 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 3.062e-24 | |
| Glyma.06G085200 | hypothetical protein | NA | 1 | Chr06:6540849–6545557 (+) | 5.025e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.15e-11 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.15e-11 | |
| Glyma.07G068200 | hypothetical protein | AT4G00310:EDA8:Putative membrane lipoprotein | 1 | Chr07:6146155–6148036 (-) | 9.321e-11 | |
| Glyma.07G068300 | hypothetical protein | AT5G62980:FOLB2:Dihydroneopterin aldolase__AT3G11750:FOLB1:Dihydroneopterin aldolase | 1 | Chr07:6169729–6172231 (+) | 4.65e-11 | |
| Glyma.07G068700 | hypothetical protein | AT2G46060:AT2G46060:transmembrane protein-like protein | 1 | Chr07:6200187–6208590 (+) | 5.056e-11 | |
| Glyma.07G068800 | hypothetical protein | NA | 1 | Chr07:6211775–6221107 (-) | 5.056e-11 | |
| Glyma.07G069400 | hypothetical protein | AT2G46020:BRM:transcription regulatory protein SNF2 | 1 | Chr07:6270176–6283087 (-) | 4.79e-12 | |
| Glyma.07G069600 | hypothetical protein | AT4G00370:ANTR2:Major facilitator superfamily protein | 1 | Chr07:6307073–6313498 (-) | 1.984e-11 | |
| Glyma.07G071800 | hypothetical protein | AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein | 1 | Chr07:6523253–6526707 (+) | 1.773e-12 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 3.15e-14 | |
| Glyma.08G141100 | hypothetical protein | AT5G64910:AT5G64910:Serine/Threonine-kinase | 1 | Chr08:10778910–10784589 (-) | 2.444e-11 | |
| Glyma.08G202000 | hypothetical protein | AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | 1 | Chr08:16375907–16384294 (-) | 6.831e-11 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 2.985e-15 | |
| Glyma.10G028500 | hypothetical protein | NA | 1 | Chr10:2476846–2478953 (+) | 1.975e-11 | |
| Glyma.10G028700 | hypothetical protein | AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain | 1 | Chr10:2485817–2497071 (-) | 1.975e-11 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 9.034e-15 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 9.034e-15 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 2.192e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 2.192e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.619e-11 | |
| Glyma.14G068100 | hypothetical protein | AT3G12550:FDM3:XH/XS domain-containing protein | 1 | Chr14:5701618–5711043 (-) | 6.453e-13 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 1.049e-15 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 2.114e-16 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 1.167e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 1.177e-13 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.59e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 4.202e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.59e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.59e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 8.93e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 1.591e-11 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 6.342e-11 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 4.06e-13 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 1.84e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 9.322e-16 | |
| Glyma.16G140600 | hypothetical protein | NA | 1 | Chr16:29836830–29839178 (+) | 1.522e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 8.018e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 8.018e-11 | |
| Glyma.16G179800 | hypothetical protein | AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein | 1 | Chr16:34022480–34027055 (-) | 8.28e-11 | |
| Glyma.16G180100 | hypothetical protein | NA | 1 | Chr16:34070806–34076053 (+) | 6.662e-12 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 3.925e-12 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 5.772e-12 | |
| Glyma.17G214600 | hypothetical protein | NA | 1 | Chr17:36049053–36054871 (-) | 7.923e-14 | |
| Glyma.17G215200 | hypothetical protein | NA | 1 | Chr17:36125880–36142936 (+) | 9.939e-12 | |
| Glyma.17G215500 | KNAT5 | NA | 1 | Chr17:36212363–36217688 (-) | 9.448e-17 | |
| Glyma.17G215700 | hypothetical protein | AT5G11040:TRS120:TRS120 | 1 | Chr17:36319785–36329259 (-) | 2.085e-11 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 1.375e-12 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 2.173e-11 | |
| Glyma.19G031200 | hypothetical protein | NA | 1 | Chr19:3870532–3874170 (-) | 4.552e-11 | |
| Glyma.19G032500 | hypothetical protein | NA | 1 | Chr19:4140729–4141955 (-) | 4.887e-11 | |
| Glyma.19G032800 | hypothetical protein | NA | 1 | Chr19:4196959–4199265 (-) | 2.204e-11 | |
| Glyma.19G033800 | hypothetical protein | AT3G02230:RGP1:reversibly glycosylated polypeptide 1 | 1 | Chr19:4352324–4355794 (-) | 1.489e-13 | |
| Glyma.19G037400 | hypothetical protein | AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein | 1 | Chr19:5224298–5228610 (-) | 8.731e-17 | |
| Glyma.19G038000 | hypothetical protein | AT3G02350:GAUT9:galacturonosyltransferase 9 | 1 | Chr19:5321094–5324327 (+) | 8.731e-17 | |
| Glyma.19G038100 | hypothetical protein | NA | 1 | Chr19:5350324–5355097 (+) | 9.454e-14 | |
| Glyma.19G038300 | hypothetical protein | NA | 1 | Chr19:5381177–5383149 (+) | 8.731e-17 | |
| Glyma.19G038400 | hypothetical protein | AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein | 1 | Chr19:5386122–5388865 (+) | 8.731e-17 | |
| Glyma.19G038800 | hypothetical protein | NA | 1 | Chr19:5452151–5457668 (-) | 1.601e-11 | |
| Glyma.19G039100 | hypothetical protein | NA | 1 | Chr19:5535436–5544281 (+) | 2.224e-12 | |
| Glyma.19G040100 | hypothetical protein | AT3G02460:AT3G02460:Ypt/Rab-GAP domain of gyp1p superfamily protein | 1 | Chr19:5773912–5781906 (-) | 3.85e-15 | |
| Glyma.19G040700 | hypothetical protein | NA | 1 | Chr19:5843994–5848776 (-) | 2.224e-12 | |
| Glyma.19G247800 | hypothetical protein | NA | 1 | Chr19:49385792–49388122 (-) | 4.009e-11 | |
| Glyma.20G034000 | hypothetical protein | AT2G03060:AGL30:AGAMOUS-like 30 | 1 | Chr20:4655939–4664465 (-) | 6.524e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 5.183e-11 | |
| Glyma.20G109000 | hypothetical protein | AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein | 1 | Chr20:35134138–35152085 (-) | 5.39e-11 |