Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P03796

Metabolite ID
P03796
Deionized mass
170.1034 Da
Average m/z
171.1107
Average RT
7.8525
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
79
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

79 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)2.044e-13
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.264e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)5.076e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.709e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)9.561e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.485e-14
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)3.838e-11
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)1.25e-14
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)3.018e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.264e-11
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)7.407e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)7.407e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.04e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)9.056e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.258e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)2.958e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.37e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.013e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.834e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.834e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.834e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)3.239e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)9.262e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.977e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)2.218e-11
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)1.717e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)6.683e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)6.652e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)6.652e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.709e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.709e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.709e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.709e-11
Glyma.08G150100 hypothetical protein AT2G44450:BGLU15:beta glucosidase 15 1Chr08:11525692–11536927 (+)4.056e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)9.244e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.967e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.58e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.139e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)6.026e-11
Glyma.11G240600 hypothetical protein NA 1Chr11:33491895–33493311 (+)4.259e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.437e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.437e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.154e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.154e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.645e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.787e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7e-13
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.06e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.41e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)8.41e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)8.41e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.485e-14
Glyma.14G177500 hypothetical protein AT3G13620:PUT4:Amino acid permease family protein 1Chr14:43740577–43742476 (-)5.435e-11
Glyma.14G179000 hypothetical protein AT1G12680:PEPKR2:phosphoenolpyruvate carboxylase-related kinase 2 1Chr14:44030814–44034325 (+)2.457e-11
Glyma.14G179200 hypothetical protein AT4G24380:AT4G24380:dihydrofolate reductase 1Chr14:44060802–44063722 (+)2.457e-11
Glyma.14G179900 hypothetical protein NA 1Chr14:44227886–44232217 (-)4.769e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.218e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.218e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.782e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.236e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.782e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.782e-13
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.838e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.836e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.309e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.796e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)3.627e-13
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)8.441e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)6.562e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)6.435e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)6.562e-13
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)1.25e-14
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)4.454e-12
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)3.243e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)9.495e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.599e-11
Glyma.19G187900 hypothetical protein AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein 1Chr19:44599748–44609219 (-)1.328e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.346e-12