Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P03044

Metabolite ID
P03044
Deionized mass
85.0524 Da
Average m/z
171.1110
Average RT
6.4740
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.208e-11
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)8.229e-13
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)6.498e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)7.203e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)6.175e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.682e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.506e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)7.174e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.208e-11
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)4.266e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)8.229e-13
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)8.268e-12
Glyma.02G294000 hypothetical protein NA 1Chr02:47237993–47240495 (+)8.824e-12
Glyma.02G294500 hypothetical protein AT5G50850:MAB1:Transketolase family protein 1Chr02:47272683–47277831 (-)3.761e-12
Glyma.02G295900 hypothetical protein NA 1Chr02:47375932–47378006 (+)1.504e-11
Glyma.02G296200 hypothetical protein AT5G55390:EDM2:ENHANCED DOWNY MILDEW 2 1Chr02:47383044–47395946 (-)1.504e-11
Glyma.02G296300 hypothetical protein AT5G55400:AT5G55400:Actin binding Calponin homology (CH) domain-containing protein 1Chr02:47399263–47406220 (-)9.205e-11
Glyma.03G013500 hypothetical protein AT1G01700:ROPGEF2:RHO guanyl-nucleotide exchange factor 2 1Chr03:1370977–1375024 (+)3.62e-12
Glyma.03G081100 hypothetical protein NA 1Chr03:21841282–21846130 (+)8.092e-11
Glyma.03G085900 hypothetical protein AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760) 1Chr03:25280967–25285887 (-)9.854e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.75e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.442e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.603e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)5.968e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.354e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.994e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.574e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)7.203e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)7.203e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)7.203e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)7.203e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)6.518e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.563e-11
Glyma.08G296900 hypothetical protein NA 1Chr08:41297891–41301852 (+)1.28e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.638e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.34e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.476e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)2.698e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.94e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.94e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.94e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.94e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)3.953e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)6.444e-14
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)3.592e-16
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)5.068e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)5.068e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)5.679e-12
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)3.911e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.506e-13
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.317e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)4.785e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.124e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.939e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.361e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.361e-11
Glyma.18G021700 hypothetical protein NA 1Chr18:1590986–1596262 (-)8.894e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.564e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.564e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)6.98e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.164e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.75e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)5.286e-13