SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G085900

Description hypothetical protein

Gene interval Chr03:25280967–25285887 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features44Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

44 matching features · page 1 of 5

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00108 4-Anilino-4-oxobutanoic acid 193.0746 12.085e-12
P00248 No candidate annotation 666.1576 19.556e-12
P00856 No candidate annotation 514.0622 15.968e-11
P01175 Pirazolac 330.0543 11.94e-11
P01600 [(2S,3S,4R,5R)-3,4,5,6-Tetrahydroxyhexan-2-yl] 2-hydroxypropanoate 238.1051 11.444e-12
P03044 N-Vinylacetamide 85.0524 19.854e-11
P04265 Commodore 449.0994 14e-11
P05733 No candidate annotation 356.0296 11.201e-11
P05872 Formebolone 344.2031 18.277e-11
P06176 Danshenol B 354.1860 12.291e-11