P02924
Metabolite ID
P02924
Deionized mass
162.9316 Da
Average m/z
163.9388
Average RT
6.0768
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
134
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
134 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G111500 | hypothetical protein | AT4G35500:AT4G35500:Protein kinase superfamily protein | 4 | Chr16:24626024–24635513 (+) | 2.418e-13 | |
| Glyma.16G114900 | hypothetical protein | NA | 3 | Chr16:25456379–25485759 (+) | 9.884e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 3 | Chr16:26324650–26336836 (+) | 3.269e-13 | |
| Glyma.16G118400 | hypothetical protein | AT2G17190:AT2G17190:ubiquitin family protein | 3 | Chr16:26356863–26371741 (-) | 1.625e-11 | |
| Glyma.05G131200 | hypothetical protein | AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein | 2 | Chr05:32421116–32425198 (-) | 1.949e-11 | |
| Glyma.08G122300 | hypothetical protein | AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 | 2 | Chr08:9435391–9437279 (+) | 3.221e-11 | |
| Glyma.08G123500 | hypothetical protein | NA | 2 | Chr08:9494946–9505931 (-) | 6.2e-11 | |
| Glyma.14G170900 | hypothetical protein | AT1G78060:AT1G78060:Glycosyl hydrolase family protein | 2 | Chr14:42298358–42306613 (-) | 3.104e-11 | |
| Glyma.14G171400 | hypothetical protein | NA | 2 | Chr14:42398866–42404627 (+) | 1.191e-11 | |
| Glyma.14G201600 | hypothetical protein | NA | 2 | Chr14:46703283–46706500 (+) | 4.281e-13 | |
| Glyma.18G196200 | hypothetical protein | AT3G09100:AT3G09100:mRNA capping enzyme family protein | 2 | Chr18:47102746–47129707 (+) | 8.463e-12 | |
| Glyma.19G029600 | hypothetical protein | NA | 2 | Chr19:3681517–3690884 (-) | 2.75e-11 | |
| Glyma.01G120000 | hypothetical protein | NA | 1 | Chr01:41270985–41274854 (+) | 2.201e-12 | |
| Glyma.01G121400 | hypothetical protein | AT5G01400:ESP4:HEAT repeat-containing protein | 1 | Chr01:41808055–41828625 (-) | 3.566e-11 | |
| Glyma.01G123900 | hypothetical protein | AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr01:42831758–42837350 (+) | 1.656e-12 | |
| Glyma.01G124100 | hypothetical protein | NA | 1 | Chr01:42886229–42892204 (-) | 4.154e-12 | |
| Glyma.01G124800 | hypothetical protein | AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 | 1 | Chr01:43072403–43076304 (+) | 3.698e-11 | |
| Glyma.01G125400 | hypothetical protein | NA | 1 | Chr01:43394231–43404097 (-) | 3.698e-11 | |
| Glyma.01G125500 | hypothetical protein | NA | 1 | Chr01:43398981–43401979 (+) | 3.698e-11 | |
| Glyma.01G126000 | hypothetical protein | AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein | 1 | Chr01:43477322–43480661 (-) | 3.698e-11 | |
| Glyma.01G126300 | hypothetical protein | NA | 1 | Chr01:43513210–43516682 (-) | 3.698e-11 | |
| Glyma.01G126400 | hypothetical protein | NA | 1 | Chr01:43526917–43529405 (-) | 3.698e-11 | |
| Glyma.01G126500 | hypothetical protein | NA | 1 | Chr01:43543307–43549330 (-) | 3.698e-11 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 9.507e-11 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 2.664e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 5.226e-11 | |
| Glyma.03G124500 | hypothetical protein | NA | 1 | Chr03:33758928–33762195 (+) | 5.812e-11 | |
| Glyma.03G147400 | hypothetical protein | NA | 1 | Chr03:36293698–36295294 (+) | 3.471e-11 | |
| Glyma.04G190200 | hypothetical protein | AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 | 1 | Chr04:46086785–46089618 (-) | 1.573e-11 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 7.826e-12 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 7.826e-12 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 5.245e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 5.192e-12 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 5.192e-12 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 5.192e-12 | |
| Glyma.05G130700 | hypothetical protein | AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr05:32376592–32384905 (+) | 1.547e-12 | |
| Glyma.05G219200 | hypothetical protein | NA | 1 | Chr05:39875137–39879113 (-) | 1.087e-13 | |
| Glyma.05G224500 | hypothetical protein | NA | 1 | Chr05:40342583–40345336 (+) | 2.565e-11 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 6.772e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 7.143e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 4.266e-18 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 7.479e-14 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 8.567e-11 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 8.567e-11 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 8.567e-11 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 1.375e-15 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 1.375e-15 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 4.582e-13 | |
| Glyma.06G275800 | hypothetical protein | AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta | 1 | Chr06:46677753–46682900 (-) | 5.895e-12 | |
| Glyma.06G285400 | hypothetical protein | AT1G06290:ACX3:acyl-CoA oxidase 3 | 1 | Chr06:47399250–47406151 (+) | 6.356e-11 | |
| Glyma.06G286100 | hypothetical protein | AT1G23280:AT1G23280:MAK16 protein-like protein | 1 | Chr06:47455227–47461077 (+) | 1.864e-11 | |
| Glyma.06G286400 | hypothetical protein | NA | 1 | Chr06:47479202–47486309 (+) | 1.864e-11 | |
| Glyma.06G291600 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr06:48024204–48029614 (+) | 1.022e-11 | |
| Glyma.06G291800 | hypothetical protein | NA | 1 | Chr06:48044194–48047197 (-) | 4.341e-12 | |
| Glyma.06G292000 | hypothetical protein | NA | 1 | Chr06:48081084–48084476 (-) | 1.022e-11 | |
| Glyma.06G292100 | hypothetical protein | NA | 1 | Chr06:48095366–48097378 (+) | 1.022e-11 | |
| Glyma.06G292200 | hypothetical protein | AT5G44290:AT5G44290:Protein kinase superfamily protein | 1 | Chr06:48100578–48107433 (-) | 4.341e-12 | |
| Glyma.06G292400 | hypothetical protein | AT4G28320:MAN5:Glycosyl hydrolase superfamily protein | 1 | Chr06:48130296–48134955 (+) | 2.654e-13 | |
| Glyma.06G292900 | hypothetical protein | AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) | 1 | Chr06:48170133–48173010 (-) | 7.976e-13 | |
| Glyma.06G305200 | hypothetical protein | AT3G21690:AT3G21690:MATE efflux family protein | 1 | Chr06:49420013–49426780 (-) | 8.482e-11 | |
| Glyma.07G013400 | hypothetical protein | AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 1 | Chr07:1028243–1033837 (-) | 9.291e-13 | |
| Glyma.07G013500 | hypothetical protein | NA | 1 | Chr07:1036819–1041984 (-) | 9.291e-13 | |
| Glyma.07G017600 | hypothetical protein | NA | 1 | Chr07:1415837–1422680 (+) | 4.374e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 7.571e-12 | |
| Glyma.08G122200 | hypothetical protein | NA | 1 | Chr08:9416766–9429995 (-) | 6.2e-11 | |
| Glyma.08G122500 | hypothetical protein | NA | 1 | Chr08:9441329–9445315 (-) | 6.2e-11 | |
| Glyma.08G122700 | hypothetical protein | AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) | 1 | Chr08:9452604–9458932 (+) | 6.2e-11 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 1.194e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 1.194e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 1.194e-11 | |
| Glyma.11G179000 | hypothetical protein | AT2G27230:LHW:transcription factor-like protein | 1 | Chr11:24412040–24417199 (+) | 8.026e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 7.341e-11 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 7.341e-11 | |
| Glyma.13G051000 | hypothetical protein | AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein | 1 | Chr13:14742455–14747878 (-) | 7.445e-12 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 2.746e-12 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 8.98e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 8.98e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 8.98e-11 | |
| Glyma.13G170600 | ALDH2B6 | aldehyde dehydrogenase family 2 member B6 | AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 | 1 | Chr13:28436396–28440865 (-) | 6.451e-11 |
| Glyma.13G203200 | hypothetical protein | AT3G52105:AT3G52105:DIS3-exonuclease-like protein | 1 | Chr13:31720004–31725252 (+) | 7.506e-12 | |
| Glyma.13G203300 | hypothetical protein | AT3G63530:BB:RING/U-box superfamily protein | 1 | Chr13:31727841–31735910 (-) | 7.506e-12 | |
| Glyma.13G203700 | hypothetical protein | NA | 1 | Chr13:31780982–31784218 (+) | 7.506e-12 | |
| Glyma.13G203900 | hypothetical protein | NA | 1 | Chr13:31793697–31796601 (-) | 1.07e-13 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 1.258e-11 | |
| Glyma.14G171200 | hypothetical protein | AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein | 1 | Chr14:42387905–42389129 (+) | 1.191e-11 | |
| Glyma.14G190100 | hypothetical protein | AT2G04280:AT2G04280:calcium ion-binding protein | 1 | Chr14:45502008–45504459 (+) | 1.454e-11 | |
| Glyma.14G201700 | hypothetical protein | NA | 1 | Chr14:46711634–46715644 (-) | 4.281e-13 | |
| Glyma.15G070100 | hypothetical protein | AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein | 1 | Chr15:5355553–5364428 (+) | 1.761e-11 | |
| Glyma.15G071600 | hypothetical protein | AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein | 1 | Chr15:5481672–5488866 (-) | 1.761e-11 | |
| Glyma.15G121000 | hypothetical protein | NA | 1 | Chr15:9563579–9565862 (+) | 8.319e-11 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.883e-11 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 2.624e-13 | |
| Glyma.15G256300 | hypothetical protein | NA | 1 | Chr15:48546007–48547401 (-) | 6.491e-12 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 1.486e-11 | |
| Glyma.16G105100 | hypothetical protein | NA | 1 | Chr16:21259552–21267517 (-) | 3.276e-11 | |
| Glyma.16G105400 | hypothetical protein | AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein | 1 | Chr16:21357465–21364357 (-) | 1.009e-11 | |
| Glyma.16G111100 | hypothetical protein | NA | 1 | Chr16:24438458–24444801 (+) | 2.418e-13 | |
| Glyma.16G111400 | hypothetical protein | AT4G35510:AT4G35510:PHD finger-like protein | 1 | Chr16:24546422–24549336 (+) | 2.456e-12 | |
| Glyma.16G115300 | hypothetical protein | NA | 1 | Chr16:25584135–25585667 (+) | 9.884e-11 | |
| Glyma.16G115400 | hypothetical protein | NA | 1 | Chr16:25604547–25606360 (+) | 9.884e-11 | |
| Glyma.16G115500 | hypothetical protein | NA | 1 | Chr16:25622503–25630816 (+) | 9.884e-11 | |
| Glyma.16G115600 | hypothetical protein | AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr16:25661245–25664376 (-) | 9.884e-11 | |
| Glyma.16G116200 | hypothetical protein | AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein | 1 | Chr16:25892277–25904773 (+) | 7.784e-11 | |
| Glyma.16G116500 | hypothetical protein | AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein | 1 | Chr16:26057276–26069534 (+) | 4.143e-12 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 6.156e-13 | |
| Glyma.16G118200 | hypothetical protein | NA | 1 | Chr16:26337169–26338323 (+) | 1.625e-11 | |
| Glyma.16G118600 | hypothetical protein | NA | 1 | Chr16:26442194–26445922 (+) | 1.625e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 5.366e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 6.871e-13 | |
| Glyma.16G140000 | hypothetical protein | AT5G01820:SR1:serine/threonine protein kinase 1 | 1 | Chr16:29738375–29739010 (+) | 4.341e-11 | |
| Glyma.16G140600 | hypothetical protein | NA | 1 | Chr16:29836830–29839178 (+) | 8.904e-13 | |
| Glyma.16G143400 | hypothetical protein | NA | 1 | Chr16:30337469–30338390 (-) | 9.073e-11 | |
| Glyma.16G144700 | hypothetical protein | AT5G66960:AT5G66960:Prolyl oligopeptidase family protein | 1 | Chr16:30514629–30519598 (+) | 5.43e-11 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 3.771e-11 | |
| Glyma.17G008200 | hypothetical protein | NA | 1 | Chr17:685577–688365 (+) | 9.86e-11 | |
| Glyma.17G064000 | hypothetical protein | AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein | 1 | Chr17:4924830–4930155 (-) | 5.881e-11 | |
| Glyma.17G064200 | hypothetical protein | AT5G57500:AT5G57500:Galactosyltransferase family protein | 1 | Chr17:4943412–4944357 (-) | 5.881e-11 | |
| Glyma.17G251200 | hypothetical protein | NA | 1 | Chr17:40605249–40607536 (+) | 1.59e-13 | |
| Glyma.17G251800 | hypothetical protein | NA | 1 | Chr17:40633579–40636068 (+) | 2.145e-11 | |
| Glyma.17G251900 | hypothetical protein | AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein | 1 | Chr17:40641019–40644794 (+) | 2.145e-11 | |
| Glyma.18G042300 | hypothetical protein | AT1G66140:ZFP4:zinc finger protein 4 | 1 | Chr18:3586380–3589732 (+) | 6.566e-11 | |
| Glyma.18G042500 | hypothetical protein | NA | 1 | Chr18:3597323–3598404 (-) | 6.566e-11 | |
| Glyma.18G201700 | hypothetical protein | NA | 1 | Chr18:48175554–48180264 (+) | 2.879e-11 | |
| Glyma.18G204200 | hypothetical protein | NA | 1 | Chr18:48697660–48700908 (+) | 4.168e-11 | |
| Glyma.18G266400 | hypothetical protein | AT3G29390:RIK:RS2-interacting KH protein | 1 | Chr18:55076548–55086297 (+) | 2.696e-11 | |
| Glyma.18G266500 | hypothetical protein | NA | 1 | Chr18:55088284–55091427 (-) | 1.81e-11 | |
| Glyma.18G301900 | hypothetical protein | AT5G13190:GILP:GSH-induced LITAF domain protein | 1 | Chr18:57953323–57956369 (-) | 8.433e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 4.413e-12 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 4.413e-12 | |
| Glyma.20G013100 | hypothetical protein | NA | 1 | Chr20:1134080–1135710 (-) | 3.415e-13 | |
| Glyma.20G101700 | hypothetical protein | AT5G08580:AT5G08580:Calcium-binding EF hand family protein | 1 | Chr20:34467936–34475476 (-) | 4.28e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 1.317e-12 | |
| Glyma.20G109600 | hypothetical protein | AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 | 1 | Chr20:35200934–35205885 (-) | 8.804e-12 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 2.285e-12 |