Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P02811

Metabolite ID
P02811
Deionized mass
278.9789 Da
Average m/z
279.9860
Average RT
5.8854
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
107
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

107 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)6.805e-14
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)6.62e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)3.793e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)5.046e-14
Glyma.16G178800 hypothetical protein NA 2Chr16:33950003–33953968 (-)3.679e-11
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 2Chr16:33954446–33960344 (+)5.999e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)9.883e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)6.62e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.542e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)2.563e-13
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.339e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.752e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)2.738e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)6.978e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.758e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)3.878e-13
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.782e-12
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 1Chr04:7187985–7192897 (+)3.996e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)7.237e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)7.237e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.258e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.33e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.33e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.33e-13
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.249e-12
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)1.048e-12
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)3.525e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.134e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.818e-21
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.715e-25
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.742e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.741e-16
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.741e-16
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)2.285e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)8.572e-15
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.184e-11
Glyma.07G013400 hypothetical protein AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein 1Chr07:1028243–1033837 (-)8.171e-12
Glyma.07G013500 hypothetical protein NA 1Chr07:1036819–1041984 (-)8.171e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.093e-12
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)9.08e-15
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)8.193e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.966e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)9.247e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.847e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.641e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.857e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)9.462e-12
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)6.024e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)6.024e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.336e-15
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.336e-15
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.336e-15
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.336e-15
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)7.39e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)9.691e-13
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)6.777e-12
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)9.38e-13
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)4.832e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.793e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)4.793e-12
Glyma.13G049100 hypothetical protein NA 1Chr13:14498952–14506408 (-)3.864e-12
Glyma.13G050500 hypothetical protein NA 1Chr13:14674243–14683099 (-)4.152e-12
Glyma.13G051000 hypothetical protein AT1G19920:APS2:Pseudouridine synthase/archaeosine transglycosylase-like family protein 1Chr13:14742455–14747878 (-)2.607e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.949e-14
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)2.071e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)2.071e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)2.071e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.638e-13
Glyma.13G237900 hypothetical protein NA 1Chr13:34809361–34816888 (-)1.179e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)1.017e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.055e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.178e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.055e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.055e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)9.593e-12
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)1.254e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)3.665e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)6.805e-14
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)1.23e-12
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)1.542e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.286e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)3.793e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)3.793e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.934e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)8.27e-12
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)4.127e-12
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)5.349e-11
Glyma.16G178700 hypothetical protein AT5G52660:AT5G52660:Homeodomain-like superfamily protein 1Chr16:33941617–33948775 (+)5.999e-11
Glyma.16G179100 BCH2 beta-carotene hydroxylase BCH2 AT4G25700:BETA-OHASE 1:beta-hydroxylase 1__AT5G52570:BETA-OHASE 2:beta-carotene hydroxylase 2 1Chr16:33969618–33972333 (-)5.999e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.478e-12
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)7.501e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)6.185e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)6.185e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.858e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.858e-12
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.869e-11
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr18:4503897–4512049 (+)1.007e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)1.244e-11
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1Chr18:48258271–48266554 (-)1.045e-11
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)5.96e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.273e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)6.986e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)5.912e-13
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)9.883e-12
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1134716–1143232 (+)6.332e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.893e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.893e-14