SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.20G211500

Description hypothetical protein

Gene interval Chr20:44820994–44827443 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features302Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records1

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0033.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

302 matching features · page 27 of 31

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P43847 Didemniserinolipid B 663.4039 16.741e-12
P43865 No candidate annotation 681.3796 13.421e-11
P43956 2-Hydroxy-6-oxo-6-(2-hydroxyphenoxy)-hexa-2,4-dienoate 250.0465 13.466e-12
P43968 Didehydrobisdethiobis(methylthio)gliotoxin 354.0706 16.967e-11
P44241 Avermectin A2a monosaccharide 760.4380 14.18e-11
P44294 No candidate annotation 513.7295 15.888e-12
P45180 No candidate annotation 199.1326 12.283e-11
P45366 Dechlorobarbamide 426.0934 15.006e-11
P45730 3beta-Sulfooxy-7beta-N-acetylglucosaminylchol-5-en-24-oylglycine 732.3037 13.369e-11
P45875 Combreglucoside 682.3926 15.687e-11