Overview Annotation GWAS Evidence Associated genes

P43865

Metabolite ID
P43865
Deionized mass
681.3796 Da
Average m/z
682.3867
Average RT
22.3036
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
21
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

21 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.888e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.624e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.888e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.081e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.78e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.78e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.78e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.829e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)5.174e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)6.813e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.974e-11
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)3.571e-13
Glyma.14G190300 hypothetical protein AT2G04240:XERICO:RING/U-box superfamily protein 1Chr14:45531920–45533895 (-)4.979e-13
Glyma.14G190400 hypothetical protein AT3G07650:COL9:CONSTANS-like 9 1Chr14:45536719–45544087 (-)4.979e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.099e-11
Glyma.15G139000 hypothetical protein NA 1Chr15:11314329–11317181 (-)4.056e-11
Glyma.16G032000 hypothetical protein AT4G01270:AT4G01270:RING/U-box superfamily protein 1Chr16:3031286–3036010 (+)7.591e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.914e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)6.216e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)5.782e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)3.421e-11