SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G187900

Description hypothetical protein

Gene interval Chr19:44599748–44609219 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G36720:AT2G36720:Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features163Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

163 matching features · page 6 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14478 N-Acetylserotonin glucuronide 394.1360 19.912e-11
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 12.04e-11
P14846 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0667 15.352e-11
P15348 Anhalidine 223.1207 14.189e-11
P16359 No candidate annotation 197.1097 15.793e-12
P16616 Pomaglumetad methionil 366.0554 11.003e-14
P16643 Cochinolide 258.0890 11.579e-14
P16866 C75 trans 254.1498 12.08e-11
P16945 Cyclopenta[cd]pyrene 226.0786 11.356e-13
P17077 Goodyerin 776.2009 11.013e-11