SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G150000

Description hypothetical protein

Gene interval Chr19:41018746–41025024 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G58060:AT3G58060:Cation efflux family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features306Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

306 matching features · page 14 of 31

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P24795 No candidate annotation 535.2631 13.055e-11
P24967 6-Hydroxyluteolin 7-[6''-(3-hydroxy-3-methylglutaryl)glucoside] 608.1388 15.805e-11
P24976 (20R,22R)-20-O,22-O-(5'-hydroxy-methyl)-furfurylidene-2beta,3beta,25-trihydroxy-14beta-methyl-18-nor-5beta-cholesta-7,12-dien-6-one 570.3155 12.056e-11
P24983 Vineomycin C 710.2647 11.162e-11
P25097 2-Methylbutyl glucosinolate 389.0798 18.486e-11
P25466 Niazinin 343.1126 13.206e-11
P25550 Aristoloterpenate II 527.1984 12.574e-13
P25683 alpha-Curcumene 202.1701 11.889e-12
P25741 MG(0:0/5-iso PGF2VI/0:0) 400.2432 11.814e-13
P25779 allo-Aromadendrane-10beta,14-diol 238.1906 11.653e-12