P25097
Metabolite ID
P25097
Deionized mass
389.0798 Da
Average m/z
390.0850
Average RT
14.6161
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
103
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
103 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G114900 | hypothetical protein | NA | 3 | Chr16:25456379–25485759 (+) | 8.903e-11 | |
| Glyma.09G274700 | hypothetical protein | NA | 2 | Chr09:49057465–49065986 (-) | 3.82e-14 | |
| Glyma.09G275800 | hypothetical protein | NA | 2 | Chr09:49116424–49122191 (-) | 3.82e-14 | |
| Glyma.09G276100 | hypothetical protein | AT2G38510:AT2G38510:MATE efflux family protein | 2 | Chr09:49139110–49143810 (-) | 3.82e-14 | |
| Glyma.09G277300 | hypothetical protein | NA | 2 | Chr09:49271634–49276648 (-) | 1.336e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 2 | Chr12:36267599–36271584 (+) | 1.443e-12 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 4.998e-12 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 4.998e-12 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 8.102e-17 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 4.968e-11 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1134716–1143232 (+) | 1.344e-11 | |
| Glyma.01G169700 | hypothetical protein | AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 | 1 | Chr01:50715084–50719427 (-) | 1.75e-12 | |
| Glyma.01G169800 | hypothetical protein | AT4G36400:D2HGDH:FAD-linked oxidases family protein | 1 | Chr01:50726088–50733347 (-) | 1.75e-12 | |
| Glyma.02G204700 | hypothetical protein | AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein | 1 | Chr02:38993365–39000790 (+) | 7.479e-11 | |
| Glyma.03G001500 | B15-3-5 | AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase | 1 | Chr03:169480–172727 (+) | 6.334e-11 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 9.187e-14 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 2.112e-15 | |
| Glyma.04G084200 | hypothetical protein | AT2G25830:AT2G25830:YebC-like protein | 1 | Chr04:7137351–7146570 (-) | 4.62e-12 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 6.446e-11 | |
| Glyma.04G190200 | hypothetical protein | AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 | 1 | Chr04:46086785–46089618 (-) | 8.966e-12 | |
| Glyma.04G234900 | hypothetical protein | AT5G53000:TAP46:2A phosphatase associated protein of 46 kD | 1 | Chr04:50332008–50336222 (-) | 3.758e-12 | |
| Glyma.04G237000 | hypothetical protein | AT1G31910:AT1G31910:GHMP kinase family protein | 1 | Chr04:50558708–50569783 (+) | 3.028e-11 | |
| Glyma.04G237200 | hypothetical protein | AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr04:50576216–50582296 (-) | 3.028e-11 | |
| Glyma.04G237500 | hypothetical protein | AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … | 1 | Chr04:50604264–50609423 (+) | 3.028e-11 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 4.505e-14 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 7.868e-11 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 9.09e-11 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 3.696e-11 | |
| Glyma.09G270400 | hypothetical protein | NA | 1 | Chr09:48735991–48740879 (+) | 5.307e-11 | |
| Glyma.09G270500 | hypothetical protein | AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | 1 | Chr09:48745649–48751140 (+) | 2.107e-11 | |
| Glyma.09G274900 | hypothetical protein | AT5G02280:AT5G02280:SNARE-like superfamily protein | 1 | Chr09:49069946–49073277 (-) | 3.82e-14 | |
| Glyma.09G275100 | hypothetical protein | AT3G08760:ATSIK:Protein kinase superfamily protein | 1 | Chr09:49079101–49084269 (-) | 3.82e-14 | |
| Glyma.09G275300 | hypothetical protein | NA | 1 | Chr09:49094668–49096996 (-) | 3.82e-14 | |
| Glyma.09G275500 | hypothetical protein | NA | 1 | Chr09:49105837–49106989 (+) | 1.334e-11 | |
| Glyma.09G275900 | hypothetical protein | AT5G01850:AT5G01850:Protein kinase superfamily protein | 1 | Chr09:49128687–49133154 (-) | 3.82e-14 | |
| Glyma.09G276000 | hypothetical protein | NA | 1 | Chr09:49131662–49132187 (+) | 3.82e-14 | |
| Glyma.09G276300 | WNK10 | AT3G51630:WNK5:with no lysine (K) kinase 5 | 1 | Chr09:49161113–49166087 (+) | 2.961e-13 | |
| Glyma.11G095000 | hypothetical protein | NA | 1 | Chr11:7206492–7209711 (-) | 5.288e-11 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 8.467e-16 | |
| Glyma.11G095600 | hypothetical protein | AT1G50460:HKL1:hexokinase-like 1 | 1 | Chr11:7249880–7254364 (-) | 4.203e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 6.306e-13 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 6.306e-13 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 1.182e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 1.182e-11 | |
| Glyma.12G183400 | hypothetical protein | NA | 1 | Chr12:34427496–34440319 (-) | 6.803e-11 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 1.443e-12 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 9.05e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 9.05e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 4.998e-12 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 1.468e-16 | |
| Glyma.13G156200 | hypothetical protein | AT1G80710:DRS1:DROUGHT SENSITIVE 1 | 1 | Chr13:27115515–27118951 (+) | 9.349e-13 | |
| Glyma.13G201600 | hypothetical protein | NA | 1 | Chr13:31521512–31522992 (+) | 2.113e-11 | |
| Glyma.14G066800 | hypothetical protein | NA | 1 | Chr14:5511222–5513114 (+) | 8.012e-11 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 3.283e-12 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 4.949e-15 | |
| Glyma.14G071600 | hypothetical protein | AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein | 1 | Chr14:6016839–6019954 (+) | 5.094e-12 | |
| Glyma.14G071700 | hypothetical protein | AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 | 1 | Chr14:6037810–6041899 (+) | 4.334e-13 | |
| Glyma.14G071800 | hypothetical protein | NA | 1 | Chr14:6040746–6041899 (-) | 4.334e-13 | |
| Glyma.14G077100 | hypothetical protein | AT5G42610:AT5G42610:calcium uniporter (DUF607) | 1 | Chr14:6486139–6488935 (+) | 1.569e-12 | |
| Glyma.14G077200 | hypothetical protein | AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein | 1 | Chr14:6498564–6506068 (+) | 1.569e-12 | |
| Glyma.14G077300 | hypothetical protein | AT1G75040:PR5:pathosis-related protein 5 | 1 | Chr14:6508609–6520744 (-) | 1.569e-12 | |
| Glyma.14G082300 | hypothetical protein | AT5G42750:BKI1:BRI1 kinase inhibitor 1 | 1 | Chr14:7130733–7132305 (+) | 5.965e-11 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 5.271e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 4.968e-11 | |
| Glyma.14G150300 | hypothetical protein | AT4G08330:AT4G08330:uncharacterized protein | 1 | Chr14:32471354–32474446 (-) | 4.573e-11 | |
| Glyma.14G204400 | hypothetical protein | AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 | 1 | Chr14:46936057–46943868 (-) | 9.16e-12 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 3.688e-14 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 4.184e-14 | |
| Glyma.16G003000 | hypothetical protein | AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein | 1 | Chr16:164584–168767 (+) | 3.681e-11 | |
| Glyma.16G003200 | hypothetical protein | NA | 1 | Chr16:172940–178668 (-) | 3.681e-11 | |
| Glyma.16G003600 | hypothetical protein | AT5G49945:AT5G49945: | 1 | Chr16:198072–202486 (-) | 1.228e-11 | |
| Glyma.16G019400 | SHAT1-5 | NAC domain-containing protein 43-like | NA | 1 | Chr16:1725643–1728272 (+) | 4.123e-11 |
| Glyma.16G020200 | hypothetical protein | NA | 1 | Chr16:1828561–1835982 (-) | 2.066e-13 | |
| Glyma.16G020500 | hypothetical protein | AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr16:1877938–1879947 (-) | 5.075e-11 | |
| Glyma.16G050500 | AFB3B | auxin signaling F-box 3 protein | AT3G26810:AFB2:auxin signaling F-box 2 | 1 | Chr16:4853237–4856710 (+) | 8.218e-12 |
| Glyma.16G050900 | COL16 | NA | 1 | Chr16:4874634–4878624 (+) | 8.883e-11 | |
| Glyma.16G051100 | hypothetical protein | NA | 1 | Chr16:4896279–4898219 (-) | 6.513e-11 | |
| Glyma.16G115300 | hypothetical protein | NA | 1 | Chr16:25584135–25585667 (+) | 8.903e-11 | |
| Glyma.16G115400 | hypothetical protein | NA | 1 | Chr16:25604547–25606360 (+) | 8.903e-11 | |
| Glyma.16G115500 | hypothetical protein | NA | 1 | Chr16:25622503–25630816 (+) | 8.903e-11 | |
| Glyma.16G115600 | hypothetical protein | AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr16:25661245–25664376 (-) | 8.903e-11 | |
| Glyma.16G117400 | hypothetical protein | NA | 1 | Chr16:26234552–26238233 (-) | 3.029e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 1.348e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 5.42e-12 | |
| Glyma.16G121000 | IQD20 | AT3G51380:IQD20:IQ-domain 20 | 1 | Chr16:26909514–26910355 (+) | 8.505e-12 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 9.356e-11 | |
| Glyma.16G138800 | hypothetical protein | NA | 1 | Chr16:29609432–29615000 (+) | 8.626e-11 | |
| Glyma.16G138900 | hypothetical protein | NA | 1 | Chr16:29620531–29621995 (+) | 7.185e-11 | |
| Glyma.16G139000 | hypothetical protein | NA | 1 | Chr16:29623540–29631451 (+) | 3.671e-11 | |
| Glyma.16G139100 | hypothetical protein | NA | 1 | Chr16:29632332–29634248 (-) | 4.823e-13 | |
| Glyma.16G180100 | hypothetical protein | NA | 1 | Chr16:34070806–34076053 (+) | 4.432e-11 | |
| Glyma.17G251200 | hypothetical protein | NA | 1 | Chr17:40605249–40607536 (+) | 1.466e-11 | |
| Glyma.17G251800 | hypothetical protein | NA | 1 | Chr17:40633579–40636068 (+) | 3.033e-12 | |
| Glyma.17G251900 | hypothetical protein | AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein | 1 | Chr17:40641019–40644794 (+) | 3.033e-12 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 2.89e-11 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 1.108e-11 | |
| Glyma.19G005200 | hypothetical protein | AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein | 1 | Chr19:472201–476152 (-) | 5.527e-12 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 1.768e-12 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 1.638e-11 | |
| Glyma.19G150000 | hypothetical protein | AT3G58060:AT3G58060:Cation efflux family protein | 1 | Chr19:41018746–41025024 (+) | 8.486e-11 | |
| Glyma.20G019500 | hypothetical protein | AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme | 1 | Chr20:2039210–2040459 (+) | 9.702e-12 | |
| Glyma.20G019700 | hypothetical protein | NA | 1 | Chr20:2047020–2050862 (-) | 6.706e-11 | |
| Glyma.20G109800 | hypothetical protein | AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr20:35213258–35219502 (+) | 6.229e-11 |