SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G102200

Description hypothetical protein

Gene interval Chr19:35024582–35025690 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G31410:AT2G31410:coiled-coil protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features229Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

229 matching features · page 20 of 23

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P45180 No candidate annotation 199.1326 13.917e-12
P45435 PE-NMe2(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) 863.5426 11.602e-11
P45533 Ixerisoside K 640.2669 11.63e-11
P46016 Lignan 238.1723 16.928e-11
P46257 No candidate annotation 495.3509 12.262e-11
P46777 1-[1-Butyl-2-oxo-4-[3-(pyridin-3-ylmethoxy)phenyl]-1,8-naphthyridin-3-yl]-3-[2,6-di(propan-2-yl)phenyl]urea 603.3179 14.691e-11
P47054 Antibiotic TAN 749A 325.2120 11.997e-14
P47411 No candidate annotation 548.7589 16.145e-11
P47899 1-(1-Phenylcyclohexyl)-4-hydroxypiperidine 259.1988 12.898e-12
P48088 3-O-(Z)-Coumaroyl beta-amyrin 572.4283 12.888e-15