SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.19G011700

Description hypothetical protein

Gene interval Chr19:1123637–1130946 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G01420:DOX1:Peroxidase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1671Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records773

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4626.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1671 matching features · page 138 of 168

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34789 (-)-Amurensisin 440.0684 11.874e-11
P34804 10-ethoxy-2methylene-10-oxodecanoic acid 242.1514 15.088e-11
P34806 No candidate annotation 435.1173 17.303e-12
P34827 Sebastianine B 373.1462 12.118e-12
P34869 Triptregeline J 657.2688 19.161e-13
P34883 No candidate annotation 781.3137 17.378e-13
P34894 Didmolamide B 556.1487 15.137e-13
P34909 PGP(PGD1/22:5(7Z,10Z,13Z,16Z,19Z)) 974.4958 12.969e-11
P34921 Xyloccensin O 700.2387 12.295e-12
P34942 Gerfelin 290.0786 15.577e-11