SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.18G298600

Description hypothetical protein

Gene interval Chr18:57614292–57617223 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G44960:AT1G44960:SNARE associated Golgi protein family

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features677Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

677 matching features · page 44 of 68

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32136 Xanthoxoline 271.0828 11.905e-11
P32240 5-Carboxyvanillic acid 212.0318 12.266e-11
P32263 4-Hydroxydemethylmedicarpin 272.0676 17.525e-11
P32326 3'-Hydroxy T-2 toxin 482.2115 18.199e-12
P32359 Codonopyrrolidium B 267.1489 12.903e-12
P32527 Quercetin 3-alpha-L-arabinopyranosyl-(1->6)-(2''-(E)-p-coumaroylglucoside) 742.1785 13.954e-11
P32536 No candidate annotation 505.1256 14.347e-11
P32569 No candidate annotation 255.0595 19.871e-12
P32580 Fenozan 50F 370.1352 15.986e-11
P32650 Thonzylamine 286.1756 12.135e-11