Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32527

Metabolite ID
P32527
Deionized mass
742.1785 Da
Average m/z
743.1821
Average RT
16.7055
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
77
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

77 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)2.92e-12
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)7.087e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)2.051e-11
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.189e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.189e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)4.389e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)2.92e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)7.087e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)7.538e-14
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)5.586e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.696e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.82e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.656e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.278e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.569e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.279e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.703e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.703e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.703e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)9.156e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)1.786e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)9.76e-16
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.678e-15
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)7.255e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.055e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.624e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.347e-11
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.834e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.834e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.834e-11
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)1.544e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)7.106e-12
Glyma.06G175200 SEOd NA 1Chr06:14822478–14829186 (-)1.766e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.583e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.189e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.189e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)5.498e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.189e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.692e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.337e-11
Glyma.09G238800 hypothetical protein AT3G28910:MYB30:myb domain protein 30 1Chr09:46114284–46116303 (-)7.532e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)9.932e-11
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)6.092e-12
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)9.932e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)2.079e-13
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)2.079e-13
Glyma.09G255700 hypothetical protein AT1G01540:AT1G01540:Protein kinase superfamily protein__AT4G01330:AT4G01330:Protein kinase superfamily protein 1Chr09:47507850–47511743 (+)1.84e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.096e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.035e-12
Glyma.11G024800 hypothetical protein NA 1Chr11:1754343–1759398 (+)5.418e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.564e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)4.825e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)4.825e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)4.825e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)4.824e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.855e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.855e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.855e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)5.493e-13
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.127e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.127e-12
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.127e-12
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.421e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)5.267e-12
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)4.794e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)8.097e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)7.285e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.066e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.066e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)2.106e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.572e-11
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.954e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.387e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.387e-13
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)6.733e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)2.837e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)9.366e-12