SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.17G121800

Description hypothetical protein

Gene interval Chr17:9746590–9748712 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features545Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

545 matching features · page 48 of 55

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46074 E-4031 401.1794 15.105e-14
P46441 Antibiotic CJ 12371 320.1013 11.348e-12
P46482 N-Methoxy-1-vinyl-beta-carboline 224.0945 12.252e-11
P46610 Sarpogrelate 429.2126 15.532e-11
P46649 1,2-di-(6Z,9Z,12Z,15Z-octadecatetraenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 762.4419 11.977e-11
P46667 No candidate annotation 1558.8251 15.053e-12
P46681 Selanc 751.4280 12.875e-12
P46832 dodecyl 2-methylpropanoate 256.2380 13.256e-11
P47178 Paspaline B 435.2745 12.996e-11
P47349 No candidate annotation 797.9366 12.361e-11