SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G210400

Description hypothetical protein

Gene interval Chr16:36949685–36953467 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G73350:AT1G73350:ankyrin repeat protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1935Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0016.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1935 matching features · page 147 of 194

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41275 No candidate annotation 426.7072 17.732e-12
P41279 6-Methyl-1'-(2-(5-methyl-2-phenyloxazol-4-yl)ethyl)spiro[benzo[d][1,3]oxazine-4,4'-piperidin]-2(1H)-one 417.2051 16.117e-11
P41281 PA(22:5(4Z,7Z,10Z,13Z,16Z)/PGJ2) 800.4662 11.036e-12
P41286 4-Hydroxytrideca-7,10-dienoylcarnitine 369.2541 11.432e-11
P41349 3alpha-Isobutyryloxytropane 211.1612 15.48e-11
P41403 Levetiracetam 170.1061 11.425e-13
P41427 Cadensin B 482.1216 15.258e-13
P41466 Arginylvaline 273.1789 19.462e-12
P41489 Carboxyethylphosphoramide 167.0472 16.289e-12
P41490 Phenylacetaldehyde 120.0556 16.631e-11