SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G196400

Description hypothetical protein

Gene interval Chr16:35782198–35790495 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G07270:XBAT33:uncharacterized protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features608Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0115.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

608 matching features · page 36 of 61

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32978 N-Acetyl-O-demethylpuromycin 499.2130 14.588e-11
P33044 Hygrophorone B14 340.2596 16.294e-13
P33159 Formoxanthone B 446.2120 19.12e-11
P33196 10-Deacetyltaxol-7-xyloside 943.3493 14.875e-12
P33341 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2105 17.233e-12
P33419 Hydroxyprolyl-Valine 230.1261 15.417e-11
P33571 Leucyl-Glycine 188.1164 12.734e-11
P33592 No candidate annotation 521.2494 12.38e-11
P33676 beta-Eucaine 247.1560 13.134e-11
P33750 6,8-Epoxy-p-menthane 154.1356 12.565e-17