SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G189100

Description hypothetical protein

Gene interval Chr16:35170253–35173950 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G05190:emb2394:Ribosomal protein L6 family

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2739Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records142

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0997.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2739 matching features · page 153 of 274

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29919 1,10-Epoxy-aristolane 220.1810 11.763e-13
P29935 Acantrifoside A 942.5143 16.709e-13
P29964 No candidate annotation 599.3859 13.371e-12
P29977 Khellactone 262.0829 12.509e-13
P30007 Stryspinolactone 272.0882 12.434e-14
P30014 gamma-Amanitin 902.3593 13.681e-17
P30039 Tigloylseneganolide A 550.2618 14.836e-14
P30042 No candidate annotation 939.4715 11.461e-13
P30048 1-Octen-3-ol 128.1192 12.442e-12
P30049 Cryptoporic acid B 440.2394 13.561e-12