SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G178800

Description hypothetical protein

Gene interval Chr16:33950003–33953968 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features105Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records75

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.8476.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

105 matching features · page 5 of 11

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20852 Edulisin I 490.1562 24.552e-12
P21082 (2S)-2-Amino-4-sulfanylbutanal 119.0422 21.152e-12
P21220 No candidate annotation 628.1387 22.151e-11
P21501 5'-Methylthioadenosine 297.0919 28.896e-14
P22543 Glutathione disulfide 612.1499 26.782e-11
P22565 Androstane-3,17-diol 17-sulfate 372.1984 21.8e-11
P22978 Secohalichondramide 872.4312 26.724e-11
P23067 Juncenolide A 570.2230 28.146e-14
P23423 Isovanillic acid glucuronide 344.0743 22.209e-11
P23442 S-(N-Hydroxy-N-methylcarbamoyl)glutathione 380.0975 22.042e-11