SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G178800

Description hypothetical protein

Gene interval Chr16:33950003–33953968 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features105Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records75

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.8476.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

105 matching features · page 3 of 11

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06768 Glycine,Cyclothialidine D 597.1728 22.297e-12
P07278 No candidate annotation 435.1175 21.073e-11
P10275 Nepenthone A 278.0412 23.634e-11
P10857 n-propylthiouracil 170.0534 24.415e-13
P11526 (-)-2,3-Dihydrocitromycetin 292.0562 21.33e-11
P11762 (S)-ATPA 228.1093 24.728e-12
P13233 2,4-Dihydroxy-7,8-dimethoxy-2H-1,4-benzoxazin-3(4H)-one 2-glucoside 403.1088 21.349e-11
P13434 Wander 486.1573 22.229e-13
P14677 S-(9-hydroxy-PGA1)-glutathione 645.3312 21.113e-11
P14723 1-(9Z-octadecenoyl)-2-(5-oxo-7-carboxy-6E-heptenoyl)-sn-glycero-3-phosphoserine 691.3337 22.928e-12