SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G178800

Description hypothetical protein

Gene interval Chr16:33950003–33953968 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features105Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records75

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.8476.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

105 matching features · page 1 of 11

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11278 27-O-Demethylrifamycin SV 683.3041 31.026e-12
P11580 Aristolindiquinone 218.0590 31.433e-13
P12578 4E,6E-undecenal 166.1341 37.791e-13
P12806 N-Hydroxysuccinimide 115.0260 33e-12
P15142 No candidate annotation 521.2481 36.224e-14
P20181 (2-Naphthyl)methanol 158.0725 32.253e-13
P25306 Ligujapone 202.1007 38.854e-12
P25345 Fura-2 641.1548 33.136e-15
P27987 (S)-2,3-Dihydro-3,5-dihydroxy-2-oxo-3-indoleacetic acid 5-[glucosyl-(1->4)-b-D-glucoside] 547.1446 31.56e-11
P29891 Ustilipid C 634.3999 33.649e-15