SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G138500

Description hypothetical protein

Gene interval Chr16:29564872–29566190 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features121Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

121 matching features · page 9 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31378 Caucasicoside B 914.4481 12.52e-11
P31856 Parathiosteroid B 445.2635 12.507e-11
P31959 Pelargonidin 3-O-[2-O-(6-(E)-feruloyl-beta-D-glucopyranosyl)-6-O-(E)-caffeoyl-beta-D-glucopyranoside]-5-O-(beta-D-glucopyranoside) 1094.2878 14.39e-13
P32315 No candidate annotation 839.3560 18.843e-11
P32726 Taxifolin 3'-(6''-phenylacetylglucoside) 584.1531 11.351e-13
P32783 No candidate annotation 774.2906 14.275e-14
P34423 Avitriptan 458.2108 11.77e-11
P34602 Lissoclinotoxin E 570.1664 14.385e-11
P34725 Cyanidin 3-(6'',6'''-disinapylsophoroside)-5-glucoside 1184.3199 13.121e-11
P35945 No candidate annotation 475.1093 19.564e-11