SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G134900

Description hypothetical protein

Gene interval Chr16:29214758–29219443 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G66470:AT5G66470:GTP-binding protein Era-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features328Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

328 matching features · page 31 of 33

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P45800 Validamycin A 497.2079 11.88e-11
P45938 No candidate annotation 613.8087 16.741e-15
P46089 Cyfluthrin 433.0565 17.206e-13
P46110 No candidate annotation 226.5511 13.774e-13
P46117 (S)-3-(6-Methoxypyridin-3-yl)-3-(2-oxo-3-(3-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)propyl)imidazolidin-1-yl)propanoic acid 439.2225 11.045e-11
P46667 No candidate annotation 1558.8251 14.37e-11
P46681 Selanc 751.4280 12.357e-11
P47028 PS(20:5(5Z,8Z,11Z,14Z,17Z)/22:6(4Z,7Z,11E,13Z,15E,19Z)-2OH(10S,17)) 885.4715 12.986e-11
P47180 13-Acetylbrevifoliol 598.2702 18.742e-11
P47312 No candidate annotation 799.9297 11.264e-11