Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47312

Metabolite ID
P47312
Deionized mass
799.9297 Da
Average m/z
800.9362
Average RT
24.6539
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)5.431e-12
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)9.698e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.685e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.685e-13
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.456e-12
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)3.588e-12
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)2.171e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)7.165e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)5.681e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.511e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.511e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)6.129e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.674e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.415e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.271e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)2.318e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.859e-11
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.859e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)4.218e-11
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 1Chr09:46835469–46838091 (-)3.809e-18
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.418e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.419e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.009e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.009e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.449e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.497e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.497e-13
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.685e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.685e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.573e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)1.026e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.489e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.456e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.312e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.613e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.312e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.312e-15
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.164e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.327e-13
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.096e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.096e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)1.264e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.639e-14
Glyma.16G145300 hypothetical protein AT2G35780:scpl26:serine carboxypeptidase-like 26__AT3G07990:SCPL27:serine carboxypeptidase-like 27 1Chr16:30604586–30608656 (+)3.692e-11
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)1.622e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.171e-12
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)1.129e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)2.702e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.245e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.245e-11
Glyma.17G095900 hypothetical protein NA 1Chr17:7512456–7513872 (-)1.179e-12
Glyma.17G096400 hypothetical protein AT1G18880:NRT1.9:Major facilitator superfamily protein 1Chr17:7575244–7578248 (-)1.962e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.119e-11
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)7.165e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.289e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)6.222e-13
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)8.632e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.939e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.94e-13