SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 273 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P46283 Leucyl-Threonine 232.1432 13.547e-11
P46292 Malyngamide I acetate 525.2883 13.811e-12
P46324 Ethopropazine 312.1675 16.164e-11
P46334 Chenodeoxycholylglutamic acid 521.3322 19.764e-12
P46443 Tetraphenylporphyrin 614.2453 18.495e-11
P46451 No candidate annotation 286.6237 19.177e-11
P46452 No candidate annotation 870.3660 17.531e-13
P46456 Batrachotoxin 538.3021 19.949e-11
P46457 1-Isopropyl-N-((6-methyl-2-oxo-4-propyl-1,2-dihydropyridin-3-yl)methyl)-6-(2-(4-methylpiperazin-1-yl)pyridin-4-yl)-1H-indazole-4-carboxamide 541.3120 13.292e-11
P46462 No candidate annotation 278.6365 14.479e-11