Overview Annotation GWAS Evidence Associated genes

P46462

Metabolite ID
P46462
Deionized mass
278.6365 Da
Average m/z
279.6438
Average RT
24.0511
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)3.029e-11
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)3.029e-11
Glyma.03G201300 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family__AT5G06320:NHL3:NDR1/HIN1-like 3 2Chr03:40980745–40990121 (-)1.948e-11
Glyma.01G022800 hypothetical protein AT5G65490:AT5G65490:suppressor-like protein 1Chr01:2296901–2303966 (+)5.506e-11
Glyma.03G199900 hypothetical protein NA 1Chr03:40880470–40884921 (+)1.511e-11
Glyma.03G200400 hypothetical protein NA 1Chr03:40929445–40931653 (+)1.511e-11
Glyma.03G200900 hypothetical protein AT3G52500:AT3G52500:Eukaryotic aspartyl protease family protein 1Chr03:40955130–40957292 (+)1.948e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)9.822e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)8.383e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.372e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.586e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)4.479e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)3.029e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)3.029e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)7.139e-12