SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G117400

Description hypothetical protein

Gene interval Chr16:26234552–26238233 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3001Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records425

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1416.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3001 matching features · page 106 of 301

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13553 Tinctormine 593.1699 12.466e-12
P13610 Streptenol D 186.1240 11.708e-11
P13653 Xanthochymusside 736.1531 16.687e-12
P13654 Myricetin 3-neohesperidoside 626.1486 17.011e-11
P13660 indole-3-acetyl-glutamate 304.1062 13.744e-11
P13661 1-Acetyl-N-salicyloyl-2-aminopropan-3-ol 253.0928 11.588e-11
P13732 Bacampicillin 465.1559 11.832e-11
P13785 Octanedioylcarnitine 317.1873 12.427e-11
P13790 No candidate annotation 317.1926 16.849e-14
P13823 N-[Bis(3-aminopropyl)amino]-N-hydroxynitrous amide 191.1370 12.271e-11