Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13610

Metabolite ID
P13610
Deionized mass
186.1240 Da
Average m/z
187.1313
Average RT
11.4973
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
83
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

83 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.454e-13
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)5.162e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)8.732e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.921e-11
Glyma.11G070200 hypothetical protein NA 2Chr11:5258153–5262782 (+)9.571e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)8.721e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.154e-19
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.331e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.231e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.454e-13
Glyma.02G044600 hypothetical protein NA 1Chr02:4131829–4134877 (+)1.474e-11
Glyma.02G074100 hypothetical protein AT5G13570:DCP2:decapping 2 1Chr02:6467452–6472617 (+)6.792e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.584e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.555e-11
Glyma.03G145600 hypothetical protein NA 1Chr03:36103398–36107031 (+)9.223e-11
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)1.416e-12
Glyma.03G145800 hypothetical protein AT5G06710:HAT14:homeobox leucine zipper protein 1Chr03:36122932–36125124 (+)2.577e-11
Glyma.03G145900 hypothetical protein AT5G06700:AT5G06700:trichome birefringence-like protein (DUF828) 1Chr03:36127816–36131230 (-)2.577e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)7.829e-16
Glyma.03G147800 hypothetical protein NA 1Chr03:36338586–36339360 (-)1.281e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)6.377e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.119e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)2.629e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.783e-11
Glyma.04G220400 hypothetical protein AT5G10020:AT5G10020:Leucine-rich receptor-like protein kinase family protein 1Chr04:49102263–49108229 (+)5.193e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.014e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.057e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.279e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.483e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.483e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)4.954e-11
Glyma.06G304200 hypothetical protein AT1G04910:AT1G04910:O-fucosyltransferase family protein 1Chr06:49352555–49358511 (-)4.822e-11
Glyma.06G305100 hypothetical protein NA 1Chr06:49413291–49417661 (-)4.508e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)3.003e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)7.435e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.035e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.921e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.921e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.921e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.921e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.256e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.156e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.022e-11
Glyma.11G069300 hypothetical protein AT4G36550:AT4G36550:ARM repeat superfamily protein 1Chr11:5211340–5217107 (+)9.471e-11
Glyma.11G069700 hypothetical protein AT5G48330:RUG2:Regulator of chromosome condensation (RCC1) family protein 1Chr11:5240442–5242232 (-)9.571e-11
Glyma.11G070300 IFR1 isoflavone reductase homolog 1 NA 1Chr11:5264434–5266437 (+)9.571e-11
Glyma.11G118200 hypothetical protein NA 1Chr11:8979431–8983783 (+)1.507e-12
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)5.727e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.417e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.223e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.223e-11
Glyma.13G081100 hypothetical protein NA 1Chr13:18881427–18886462 (-)3.865e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)8.721e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.309e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.309e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.309e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.121e-12
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)1.129e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)9.998e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)5.987e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)5.987e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.987e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)4.988e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.331e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)7.173e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)5.075e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)5.162e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)5.162e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)5.162e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)5.162e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.708e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)8.2e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.804e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.908e-11
Glyma.16G144900 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 1Chr16:30549575–30553059 (+)7.19e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)5.456e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)5.456e-11
Glyma.18G110500 hypothetical protein NA 1Chr18:13060060–13070455 (+)2.341e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.899e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.899e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.865e-12
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.236e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)3.837e-12