SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G111400

Description hypothetical protein

Gene interval Chr16:24546422–24549336 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G35510:AT4G35510:PHD finger-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features615Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

615 matching features · page 17 of 62

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12469 2,5-Dimethylfuran 96.0568 17.283e-15
P12478 5,7-octadienoic acid 140.0839 12.095e-16
P12486 Prosulfocarb 251.1344 11.268e-11
P12516 Gallic acid 170.0196 16e-11
P12648 Losmapimod 383.2008 11.488e-17
P12657 4,4'-Stilbenedicarboxamidine dihydrochloride 264.1403 11.907e-12
P12806 N-Hydroxysuccinimide 115.0260 12.684e-11
P12956 Funebral 237.0988 11.904e-13
P12962 Cyclobis-1,6-alpha-nigerosyl 648.2134 12.285e-11
P12985 6-Tuliposide B 294.0949 12.057e-13