SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G062500

Description hypothetical protein

Gene interval Chr16:6099546–6105267 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features64Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records9

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1406.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

64 matching features · page 4 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P22424 Loperamide 476.2217 16.252e-11
P22578 No candidate annotation 583.1306 14.726e-11
P23340 Mesifurane 142.0649 15.016e-12
P23422 Tryptophol [xylosyl-(1->6)-glucoside] 455.1791 11.084e-11
P24572 Saframycin R 622.2276 12.222e-11
P25505 Dracotanoside A 833.3882 15.286e-11
P28438 Ashimycin B 639.2807 18.03e-12
P28486 Tasumatrol E 648.2753 15.677e-13
P28775 N-Acetyl-7-O-acetylneuraminate 351.1174 18.068e-11
P32536 No candidate annotation 505.1256 18.389e-11