SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G051100

Description hypothetical protein

Gene interval Chr16:4896279–4898219 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features363Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

363 matching features · page 9 of 37

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12822 A 75943 281.1601 18.72e-14
P12955 Decahydro-6-(phosphonomethyl)-3-isoquinolinecarboxylic acid 277.1073 18.732e-11
P13076 Secologanoside dimethyl ester 418.1452 17.696e-11
P13423 Rhodiolinin 480.1017 16.486e-12
P13454 2-(3,4-Dihydro-2,2-dimethyl-6-nitro-2H-1,4-benzoxazin-4-yl)pyridine N-oxide 301.1046 12.568e-12
P13873 No candidate annotation 939.2621 12.25e-11
P13940 BL IV 466.0899 13.486e-12
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 13.097e-11
P14156 Validamycin G 513.2050 12.332e-11
P14158 Physalien 650.1559 14.854e-12