Overview Annotation GWAS Evidence Associated genes

P13454

Metabolite ID
P13454
Deionized mass
301.1046 Da
Average m/z
302.1109
Average RT
11.4506
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)3.022e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)7.033e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)7.033e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)4.72e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.462e-13
Glyma.16G137600 hypothetical protein NA 2Chr16:29468438–29472890 (-)1.168e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.004e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.004e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.447e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.442e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.678e-14
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)9.88e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)7.947e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)7.947e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.448e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.448e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)7.033e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.462e-13
Glyma.14G197700 hypothetical protein AT5G58470:TAF15b:TBP-associated factor 15B 1Chr14:46291986–46298337 (+)3.648e-12
Glyma.14G198000 hypothetical protein NA 1Chr14:46334117–46336863 (+)3.648e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)8.104e-15
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)7.108e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)2.568e-12
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)5.895e-20
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)7.195e-13
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.141e-13