SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.16G050900

Alias COL16

Description Not annotated

Gene interval Chr16:4874634–4878624 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features402Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records25

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0622.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

402 matching features · page 40 of 41

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52148 Ozanimod 404.1855 18.867e-11
P52233 No candidate annotation 232.6061 14.911e-12
P53033 7-Oxononane-1,1,9-tricarbaldehyde 226.1222 15.551e-12
P53061 No candidate annotation 285.8966 12.358e-11
P53547 PA(i-12:0/5-iso PGF2VI) 662.3876 12.15e-11
P53742 Cadensin G 468.0981 16.43e-11
P53884 Orthosiphol J 612.2585 11.001e-11
P54195 No candidate annotation 665.1617 19.496e-12
P54549 Akuammine 382.1900 11.32e-11
P54617 No candidate annotation 606.9931 12.784e-11