Overview Annotation GWAS Evidence Associated genes

P52148

Metabolite ID
P52148
Deionized mass
404.1855 Da
Average m/z
405.1930
Average RT
28.4277
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.385e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)6.062e-12
Glyma.16G134700 hypothetical protein NA 2Chr16:29152068–29164660 (-)2.552e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.396e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.396e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)1.221e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.486e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.79e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.79e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.563e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.524e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.524e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.524e-11
Glyma.06G185400 hypothetical protein AT5G65200:PUB38:plant U-box 38 1Chr06:16108185–16111175 (-)5.608e-13
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)2.84e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)1.619e-12
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)1.619e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.588e-11
Glyma.14G057400 hypothetical protein NA 1Chr14:4587989–4592261 (+)5.667e-12
Glyma.14G057600 hypothetical protein NA 1Chr14:4604289–4605563 (+)3.954e-11
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)7.177e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)8.654e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)8.867e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.429e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)2.044e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)7.854e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.657e-11