SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.15G109500

Description hypothetical protein

Gene interval Chr15:8591856–8593774 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G22030:AT4G22030:F-box protein with a domain protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features72Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

72 matching features · page 2 of 8

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10197 Triptregeline B 653.2514 14.362e-11
P12409 Ericamycin 499.1248 11.863e-11
P12668 No candidate annotation 135.0642 12.741e-12
P13036 Penconazole 283.0678 11.072e-12
P13777 Lidamidine 220.1289 11.564e-11
P14592 N-ethyl-7H-purine-6-sulfonamide 227.0510 17.082e-13
P14612 Fluroxene 126.0305 19.765e-11
P15711 Catechin 5-O-(2-feruloyl-6-p-coumaroyl-beta-D-glucopyranoside) 774.2098 18.141e-11
P16233 Bacampicillin 465.1570 11.216e-11
P16419 6beta-Angeloyloxy-10alphaH-9-oxofuranoeremophilane 330.1825 12.976e-11