Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13777

Metabolite ID
P13777
Deionized mass
220.1289 Da
Average m/z
221.1346
Average RT
11.5576
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 6Chr16:36856833–36863994 (-)1.749e-13
Glyma.07G010200 hypothetical protein NA 2Chr07:753451–763749 (-)3.258e-11
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 1Chr01:55836387–55840615 (+)2.357e-12
Glyma.01G231700 hypothetical protein AT4G10180:DET1:light-mediated development protein 1 / deetiolated1 (DET1) 1Chr01:55856415–55863866 (+)3.805e-11
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 1Chr01:55869836–55872417 (+)4.425e-12
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)1.763e-11
Glyma.06G114700 hypothetical protein AT1G77510:PDIL1-2:PDI-like 1-2 1Chr06:9307220–9315112 (+)7.807e-11
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)4.193e-11
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)4.193e-11
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.355e-11
Glyma.07G010500 hypothetical protein AT1G55150:RH20:DEA(D/H)-box RNA helicase family protein 1Chr07:803172–810263 (+)3.258e-11
Glyma.07G010600 hypothetical protein NA 1Chr07:811039–816200 (+)3.258e-11
Glyma.07G010800 hypothetical protein NA 1Chr07:824697–827823 (-)3.258e-11
Glyma.07G010900 hypothetical protein AT1G55180:PLDEPSILON:phospholipase D alpha 4 1Chr07:830443–834361 (-)3.258e-11
Glyma.07G011100 hypothetical protein AT3G13700:AT3G13700:RNA-binding (RRM/RBD/RNP motifs) family protein 1Chr07:843406–847022 (+)3.258e-11
Glyma.07G011200 hypothetical protein AT5G49010:SLD5:DNA replication protein-like protein 1Chr07:847783–850968 (-)3.258e-11
Glyma.07G011600 hypothetical protein AT3G21250:ABCC8:multidrug resistance-associated protein 6 1Chr07:885910–891586 (+)3.258e-11
Glyma.08G148500 hypothetical protein AT3G19860:bHLH121:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:11362991–11368184 (-)6.284e-11
Glyma.08G223400 hypothetical protein AT1G51660:MKK4:mitogen-activated protein kinase kinase 4 1Chr08:18127350–18129276 (+)8.532e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.514e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)6.521e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)3.515e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)3.515e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)3.515e-11
Glyma.11G122500 hypothetical protein AT1G49430:LACS2:long-chain acyl-CoA synthetase 2 1Chr11:9336389–9344401 (+)1.582e-11
Glyma.11G122700 hypothetical protein NA 1Chr11:9354319–9356396 (-)1.02e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)6.609e-14
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.302e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.302e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.302e-12
Glyma.14G202400 hypothetical protein AT1G21480:AT1G21480:Exostosin family protein 1Chr14:46768802–46772377 (+)8.54e-11
Glyma.14G202500 hypothetical protein NA 1Chr14:46773824–46775761 (+)8.54e-11
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)2.295e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.952e-16
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.95e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.95e-11
Glyma.15G107500 hypothetical protein NA 1Chr15:8435042–8443925 (+)1.269e-11
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)4.65e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)1.541e-11
Glyma.15G109500 hypothetical protein AT4G22030:AT4G22030:F-box protein with a domain protein 1Chr15:8591856–8593774 (-)1.564e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)2.997e-12
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)1.08e-12
Glyma.15G111200 hypothetical protein AT1G11950:AT1G11950:Transcription factor jumonji (jmjC) domain-containing protein 1Chr15:8705907–8710609 (-)5.898e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.93e-13
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.521e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)1.479e-11
Glyma.16G138400 hypothetical protein NA 1Chr16:29560913–29562163 (+)9.406e-13
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.513e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.686e-13
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.692e-11
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.539e-14
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.933e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)2.845e-11
Glyma.20G108600 hypothetical protein NA 1Chr20:35099991–35104464 (+)6.348e-11