SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.14G072200

Alias Ipk1

Description Not annotated

Gene interval Chr14:6059598–6063755 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features332Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

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Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

332 matching features · page 7 of 34

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P10026 Luteolin 3'-methyl ether 7-glucuronide-4'-rhamnoside 622.1508 14.298e-11
P10200 trans-2-trans-4-Heptadien-1-ol 112.0874 11.063e-13
P10317 Bz-Camp 433.0759 15.35e-12
P10420 Dioxolamycin 257.0891 17.138e-14
P10463 Nitrazine 233.1231 12.264e-12
P10553 No candidate annotation 299.1808 17.278e-11
P10582 Phomonitroester 239.0794 13.593e-11
P10650 Hexamethylene diisocyanate 168.0874 11.333e-12
P10689 1-(Pentafluorophenyl)propane 210.0480 16.752e-11
P10690 4,2',3',4'-Tetrahydroxychalcone 4'-O-(2''-O-p-coumaroyl-6''-O-acetyl)glucoside 622.1619 18.86e-12