SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G135700

Description hypothetical protein

Gene interval Chr13:24812720–24818735 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features4376Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records2685

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6136.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

4376 matching features · page 271 of 438

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00676 3-Hydroxybutyric acid 104.0469 19.269e-11
P00715 Loviride 350.0610 17.512e-11
P00724 Dinitramine 322.0876 18.706e-11
P00771 Rhodamine 123 344.1198 12.579e-11
P00811 gamma-Aminobutyric acid glutamate 232.1064 15.337e-11
P00827 4,5-Dihydro-4-((1-piperazinyl)acetyl)-7-(3-(trifluoromethyl)phenyl)pyrazolo(1,5-a)pyrimidine-3-carbonitrile 416.1530 15.044e-12
P00847 5,7,2',5'-Tetramethoxyflavanone 344.1236 18.364e-11
P00856 No candidate annotation 514.0622 12.12e-12
P00900 2,3-Diphenylacrylic acid 224.0855 11.311e-11
P00920 (-)-Secoplicamine 464.1939 11.763e-11