Overview Annotation GWAS Evidence Associated genes

P00676

Metabolite ID
P00676
Deionized mass
104.0469 Da
Average m/z
105.0546
Average RT
3.6574
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.5e-12
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)7.766e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.674e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)2.073e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.931e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.878e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.91e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.545e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.269e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.269e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.269e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)9.409e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)5.689e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)3.237e-11
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)6.811e-11