SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G134400

Description hypothetical protein

Gene interval Chr13:24677399–24693129 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2619Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2455

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4769.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2619 matching features · page 76 of 262

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P26163 Kupitengester 1 637.2575 34.432e-16
P26181 No candidate annotation 898.3809 35.394e-11
P26205 N-Hydroxy-MeIQx 229.0943 36.475e-12
P26216 trans-2-Enoyl-OPC6-CoA 1013.2870 33.965e-15
P26217 6-methylthiohexyldesulfoglucosinolate 369.1266 31.264e-12
P26244 Phosmidosine B 459.1266 32.157e-11
P26278 Miraziridine A 668.3922 31.256e-13
P26285 No candidate annotation 175.0710 32.276e-12
P26288 N,O,O-Trimethylstephavanine 539.2216 31.197e-14
P26346 D-Glucose, 2-deoxy-2-[[(methylnitrosoamino)carbonyl]amino]- 265.0911 31.065e-11