Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26163

Metabolite ID
P26163
Deionized mass
637.2575 Da
Average m/z
638.2611
Average RT
14.8948
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
91
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

91 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.672e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)7.232e-14
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)4.432e-16
Glyma.02G062600 hypothetical protein AT2G23540:AT2G23540:GDSL-like Lipase/Acylhydrolase superfamily protein 2Chr02:5645621–5648965 (+)5.797e-13
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)2.633e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.177e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.674e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 2Chr13:31727841–31735910 (-)8.766e-11
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)2.044e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)7.232e-14
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)7.93e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)7.93e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)2.827e-13
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.473e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.192e-19
Glyma.03G046000 hypothetical protein AT1G58170:AT1G58170:Disease resistance-responsive (dirigent-like protein) family protein 1Chr03:5848597–5849782 (-)1.248e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.473e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.387e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.811e-14
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.811e-14
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.811e-14
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)9.78e-14
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)3.851e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.146e-26
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.238e-19
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.304e-14
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)5.955e-14
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)5.955e-14
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)8.005e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.436e-19
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.436e-19
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)6.253e-13
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.006e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)3.104e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)7.18e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)7.18e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.017e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.908e-13
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)3.458e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.822e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.249e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.187e-12
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.215e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.826e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.865e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.865e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.865e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.865e-14
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)4.91e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.29e-14
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)4.91e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.867e-12
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)3.128e-11
Glyma.11G126100 hypothetical protein AT1G08450:CRT3:calreticulin 3 1Chr11:9581659–9588340 (+)2.44e-12
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.395e-16
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.395e-16
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.395e-16
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)4.062e-12
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)1.257e-11
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 1Chr11:25044939–25052549 (+)8.876e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.222e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.222e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)2.956e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)7.351e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.674e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.31e-11
Glyma.12G228300 hypothetical protein AT3G15030:TCP4:TCP family transcription factor 4 1Chr12:38813527–38816237 (-)4.498e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)4.432e-16
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.159e-14
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)8.767e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.137e-11
Glyma.14G198100 hypothetical protein NA 1Chr14:46337677–46340654 (+)3.514e-12
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)6.91e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.411e-15
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)6.104e-13
Glyma.15G275100 hypothetical protein AT5G42470:AT5G42470:BRCA1-A complex subunit BRE-like protein 1Chr15:51350998–51355557 (-)6.765e-12
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)2.029e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.672e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)7.988e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.083e-11
Glyma.16G158300 hypothetical protein AT5G43140:AT5G43140:Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 1Chr16:31859405–31862567 (+)2.344e-11
Glyma.16G158400 hypothetical protein AT5G48100:TT10:Laccase/Diphenol oxidase family protein 1Chr16:31863760–31867327 (-)2.344e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)6.358e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.198e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.343e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.343e-13
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)3.277e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.178e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)4.417e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)4.627e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.463e-11