SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.13G134400

Description hypothetical protein

Gene interval Chr13:24677399–24693129 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2619Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records2455

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4769.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2619 matching features · page 193 of 262

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23912 7,3'-Dimethylorobol 314.0770 21.95e-12
P23950 Arachidonyltrifluoromethane 356.2286 22.771e-11
P23960 Upunaphenol N 934.2723 21.046e-11
P24058 Naphthoquine 409.1912 23.58e-12
P24059 1-[Fluoro(methoxy)phosphoryl]oxyicosa-5,8,11,14-tetraene 386.2359 21.296e-12
P24202 Palicoside 530.2262 23.543e-13
P24251 Ilicifoline 732.2713 26.375e-13
P24265 No candidate annotation 417.1166 23.416e-11
P24271 No candidate annotation 535.7805 21.247e-12
P24297 No candidate annotation 307.6643 22.243e-11